LinDing Group

Deform-nu

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The web-server estimates DNA roll-based energy, bending energy, shearing energy and nucleosome occupancy for submitted sequences.

 

Caveat

(1) For each submission, the input DNA sequences should be in FASTA format.

(2) The length of each sequence is requested to be in the range of 129-5000 bp, and each sequence should be typed in a single line without any newline character within the sequence.

(3) For each submission, at most 50 sequences each of which is shorter than 50000 bp are allowed.

(4) In output, 147 values of nucleosome occupancy at each end of the sequences are unreliable due to boundary effect.